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Edits for the Acknowledgements and the How Sourdough Works chapter (#11)
* edit acknowledgements * finish edits to section 2.1 * finished editing amylase section * fix italics * began editing the protease section * finished editing protease section * edited the improving enzymatic activity chapter * started editing yeast section * continue to edit yeast section * finished eidts to the yeast section * final edits to the how sourdough works chapter
This commit is contained in:
@@ -1,10 +1,8 @@
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In this chapter we are looking at the basics of how sourdough ferments.
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For that we will first look at enzymatic reactions
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that happen in your flour. These reactions are induced
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the moment you add water to your flour. They are also
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the basis that trigger the fermentation process. To understand
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the fermentation process we are having a closer look at the involved
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yeast and bacterial microorganisms.
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In this chapter, we will cover the basics of how sourdough ferments.
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First, we will look at the enzymatic reactions that take place
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in your flour the moment you add water, triggering the fermentation
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process. Then, in order to better understand this process, we will
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learn more about the yeast and bacterial microorganisms involved.
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\begin{figure}[!htb]
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\includegraphics[width=\textwidth]{infographic-enzymes}
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@@ -14,195 +12,207 @@ yeast and bacterial microorganisms.
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\section{Enzymatic reactions}
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When mixing flour and water several enzymatic reactions
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start. A plant produces seeds to reproduce. The seed
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contains all the nutrients a new plant needs to sprout.
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While the seed is dry the seed is in hibernation mode. It
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can be sometimes be stored for several years. The moment water is added
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to the seed the sprouting process starts. The seed turns
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into a germ. The stored nutrients have to be converted
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into something that the germ can use. The catalyst for these
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reactions is water. The first roots can be produced with the stored nutrients.
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Furthermore the seed typically contains the first leaves
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of the plant. The first leaves are built to start the photosynthesis
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process. This is the plants' engine. With energy from photosynthesis
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the plant can keep growing more roots. This way more water
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and nutrients can be accessed from the soil. The extended
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nutrients allow the plant to form more leaves and thus
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increase the photosynthetic activity.
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To understand the many enzymatic reactions that take place when flour
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and water are mixed, we must first understand seeds and their role in
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the lifecycle of wheat and other grains.
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Of course a ground flour can no longer sprout. But the enzymes
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that trigger this process are still present. That's why it's
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important to not mill the grains at a too high temperature.
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This could possibly damage some of the enzymes. Normally
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the seed of the flour shields the germ against pathogens initially.
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However as we grind the flour the contents of the seed
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are exposed. This is ideal for our sourdough microorganisms.
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The yeast can be considered a saprotrophic fungus.
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They can't prepare their own food. As the enzymes start
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to be activated more and more food becomes available
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for the yeast and bacteria.
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Seeds are the primary means by which many plants, including wheat,
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reproduce. Each seed contains the embryo of another plant, and must
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therefore contain all the nutrients that new plant requires to grow.
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The two main enzymes for bread making are amylase and protease.
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Understanding their role is a key puzzle piece to be able
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to make better tasting bread at home.
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When the seed is dry, it is in hibernation mode and can sometimes be
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stored for several years. The moment it comes into contact with water,
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however, it begins to sprout. The seed turns into a germ, requiring the
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stored nutrients to be converted into something the plant can use while
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it grows. The catalyst that makes the associated reactions possible is water.
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The seed typically contains the first prototypical leaves of the plant,
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and can put down roots using the stored nutrients inside. Once those leaves
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break through the soil and come into contact with the sunlight above, they
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begin to photosynthesize. This process is the plant's engine, and with the
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energy photosynthesis produces, the plant can continue to grow more roots,
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enabling it to access additional nutrients from the soil. These additional
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nutrients allow the plant to grow more leaves, increasing its photosynthetic
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activity so that it can thrive in its new environment.
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Of course, a ground flour can no longer sprout. But the enzymes that
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trigger this process are still present. That's why it's important not to
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mill grains at too high a temperature, as doing so could damage some of
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these enzymes.
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Normally, the grain seed shields the germ against pathogens. However, as the
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grain is ground into flour, the contents of the seed are exposed. This is ideal
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for our sourdough microorganisms.
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% I removed the line referencing yeast as a saprotrophic fungus since you
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% cover this later on in the chapter and removing that helps the text to
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% flow more smoothly.
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Neither the yeast nor the bacteria can prepare their own food. However, as
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the enzymes are activated, the food they need becomes available, allowing them
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to feed and multiply.
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The two main enzymes involved in this process are \textit{amylase} and
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\textit{protease}. For reasons that will soon be made clear, they are of the
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utmost importance to the home baker and their role in the making of sourdough
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is a key puzzle piece to making better-tasting bread.
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\subsection{Amylase}
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Sometimes when you chew on a potato or a piece of bread
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for a prolonged period of time you will notice a bit of sweetness
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arising in your mouth. That's because your salivary glands
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are also producing amylase. Amylase breaks down complex
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starch molecules into easier digestible sugars. The germ
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needs this in order to be able to produce more plant matter.
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Your body needs this in order to start the digesting process.
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Normally your microorganisms can't consume the freed maltose molecules
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as they are hidden in the germ. But as we ground the flour
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a feeding frenzy starts. Generally the warmer the temperature
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the faster this reaction happens. That's why a long fermentation
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is a key factor to make great bread. It takes time
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for your amylase to break down most of the starch. Furthermore
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not all sugars are consumed by the yeast. Some remain and
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are responsible for enhanced browning during the baking
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process.
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Sometimes, when you chew on a potato or a piece of bread for a long period
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of time, you'll perceive a sweet flavor on your tongue. That's because your
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salivary glands produce amylase. Amylase breaks down complex starch molecules
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into easily-digestible sugars. The germ needs this to produce more plant
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matter, and your body needs this to kick-start the digestive process. Normally,
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the microorganisms on the surface of the grain can't consume the freed maltose
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molecules, which remain hidden inside the germ. But as we grind the flour, a
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feeding frenzy takes place. Generally, the warmer the temperature, the faster
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this reaction occurs. That's why a long fermentation is key to making great
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bread. It takes time for the amylase to break down most of the starch into
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simple sugars, which are not only consumed by the yeast but are also essential
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to the \textit{Maillard reaction}, responsible for enhanced browning during the
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baking process.
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If you are a hobby brewer you will know that it's
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important to keep your brew on certain temperatures for a
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while to allow the different amylases to convert starches
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into sugar \cite{beer+amylase}. There's a test frequently used by brewers
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to determine that all the starches have been converted.
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It's called the Iodine starch test. You take a bit of your brew
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and then add a bit of iodine. If the color is blue/black
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you know that you still have starches left that haven't been
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converted by amylases yet. I wonder if such a test would work
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for a bread dough as well? Now industrial bakeries
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that use yeast to make speed doughs in a short period of
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time face this issue. Their approach is to add malted
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flour to the dough mix. The malted flour contains a lot
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of enzymes and will thus help to have a faster fermentation
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period. Check the packaging of the breads that you bought,
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if you find {\it malt} in the list of ingredients chances
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are that this strategy has been used. There are two categories
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of malts. You have enzymatically active malt and inactive
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malt. The active malt hasn't been heated to above 70°C
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when the amylases start to degrade under heat. The inactive
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malt has been heated to higher temperatures and thus
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has no impact on your flour.
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If you're a hobby brewer, you'll know that it's important to keep your beer at
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certain temperatures to allow the different amylases to convert the contained
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starches into sugar \cite{beer+amylase}. This process is so important that
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there's a frequently used test to determine whether or not all the starches
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have been converted.
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This test, called the \textit{Iodine Starch Test}, involves mixing iodine into
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a sample of your brew and checking the color. If it's blue or black, you know
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you still have unconverted starches. I wonder if such a test would also work
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for bread dough?
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Industrial bakers that add especially active yeast to produce bread in a short
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period of time face a similar issue. Their approach is to add malted flour to
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the dough. The malted flour contains many enzymes and thus speeds up the
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fermentation process. The next time you're at the supermarket, check the
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packaging of the bread you buy. If you find {\it malt} in the list of
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ingredients, chances are this strategy was used.
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Note that there are actually two categories of malt. One is {\it enzymatically
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active malt}, which has not been heated to above 70°C, where the amylases begin
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to degrade. The other is {\it inactive malt}, which has been heated to higher
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temperatures and thus has no impact on your flour.
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\subsection{Protease}
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The second very important enzyme is the protease. Proteases
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break down proteins into smaller proteins or amino acids.
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Gluten for instance is a storage protein built by wheat.
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The gluten is broken down and converted the moment the
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seed starts to sprout. That's because the seed needs
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smaller amino acids to build the roots and other plant material.
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If you ever try to make a wheat based dough and just keep
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it for several days at room temperature you will notice
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how your gluten network starts to break down. The dough
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no longer holds together. You can just fully tear it apart.
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I have had this happen to me when I was trying to make
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doughs directly with dried sourdough starter. The fermentation
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speed was so low that it took 3-4 days for the dough
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to be ready. The root cause for this issue is the protease.
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By adding water to the dough the protease was activated
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and started to ready amino acids for the germ in order to be
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able to sprout. Another interesting experiment that viusalises
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the importance of protease is the following. Try to make a
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fast dough within 1-2 hours. Simply use a large quantity
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of dry yeast. Your dough will be leavened and increase in size.
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Bake your dough and notice the crumb of your baked dough.
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You will notice that the crumb is quite dense and not as
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fluffy as it could be. That's because the protease enzyme
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didn't have enough time to do its job. At the start
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when kneading your dough is very elastic. It holds together
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very well. Over the course of the fermentation process
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your dough will become more extensible \cite{protease+enzyme+bread}.
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Some of the gluten bonds start to naturally break
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down due to the protease proteolysis. This makes it easier
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for your dough to be inflated. That's why a long
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fermentation process is important when you want to
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achieve very fluffy and open crumbs with your sourdough
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bread. Next to using great ingredients, the long and
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slow fermentation is one of the main reasons why
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Neapolitan pizza tastes so great. The soft and fluffy
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edge of the pizza is achieved because of the protease
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creating a very extensible easy to inflate dough. Because
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the fermentation process is typically longer than 8
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hours a flour with a higher gluten content is used. There
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is more gluten that can be broken down by the protease.
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By using a weaker flour you might end up with a dough
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that's already broken down too much and will then tear
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when trying to make a pizza pie. Traditionally the pizza
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has probably been made with sourdough. In modern times
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it is made with yeast as handling a yeast based
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dough can be done easier on a larger scale. The dough
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stays good for a longer period of time. If you were to use
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sourdough you might have a window of 30-90 minutes when
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your dough is perfect. Afterwards the dough might
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start to deteriorate because of bacteria breaking
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down the gluten network too much.
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Just as amylase breaks starches down into simple sugars, protease breaks
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complex proteins down into simpler proteins and amino acids. Because wheat
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contains gluten, a protein that's essential to the structure of bread,
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protease necessarily plays a crucial role in the baking of sourdough.
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Since the grain seeds require smaller amino acids to build roots and other
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plant materials, the gluten in those seeds will begin to break down the moment
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they sprout, and since adding water to flour activates those same enzymes,
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the same process occurs in bread dough.
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If you've ever tried to make a wheat-based dough and kept it at room
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temperature for several days, you'll have discovered for yourself that the
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gluten network breaks down so that the dough can no longer hold together. Once
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this happens, the dough easily tears, holds no structure, and is no
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longer suitable for baking bread.
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This happened to me once when I tried to make sourdough directly from a dried
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starter. At three to four days, the fermentation speed was so slow that the
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gluten network broke down. The root cause for this issue was protease.
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By adding water to your dough, you activate the protease, and this gets to work
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in readying amino acids for the germ.
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Here's another interesting experiment you can try to better visualize the
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importance of protease: Make a fast-proofing dough using a large quantity
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of active dry yeast. In one to two hours, your dough should have leavened and
|
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increased in size. Bake it, then examine the crumb structure. You should see
|
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that it's quite dense and nowhere near as fluffy as it could have been. That's
|
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because the protease enzyme wasn't given enough time to do its job.
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|
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At the start, while kneading, a dough becomes elastic and holds together very
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well. As that dough ferments, however, it becomes more loose and extensible
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\cite{protease+enzyme+bread}. This is because some of the gluten bonds have
|
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been broken down naturally by the protease through a process known as
|
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\textit{proteolysis}. This is what makes it easier for the yeast to inflate the
|
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dough, and it's why a long fermentation process is critical when you want to
|
||||
achieve a fluffy, open crumb with your sourdough bread.
|
||||
|
||||
Aside from using great ingredients, the slow fermentation process is one of the
|
||||
main reasons Neapolitan pizza tastes so great; because the protease creates an
|
||||
extensible, easy-to-inflate dough, a soft and airy edge is achieved.
|
||||
|
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Because the fermentation process typically takes longer than eight hours, a
|
||||
flour with a higher gluten content should be used. This gives the dough more
|
||||
time to be broken down by the protease without negatively affecting its
|
||||
elasticity. If you were to use a weaker flour, you might end up with a dough
|
||||
that's broken down so much that it tears during stretching, making it
|
||||
impossible, for example, to shape it into a pizza pie.
|
||||
|
||||
Traditionally, pizza has been made with sourdough, but in modern times it is
|
||||
made with active dry yeast, as the dough stays good for a longer period of time
|
||||
and is much easier to handle on a commercial scale. If you were to use
|
||||
sourdough, you might have a window of thirty to ninety minutes before the dough
|
||||
begins to deteriorate, both because of the protease acting for a longer period
|
||||
of time and the byproducts of bacteria, which we'll discuss in more detail later
|
||||
in this chapter.
|
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|
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\subsection{Improving enzymatic activity}
|
||||
|
||||
As explained previously malt is a common trick used
|
||||
to speed up enzymatic activity. I personally prefer
|
||||
to avoid malt in most of my recipes. Instead I use
|
||||
a trick I observed when making whole wheat doughs.
|
||||
No matter what I tried I could never achieve baking
|
||||
a whole wheat bread with the desired crust and crumb
|
||||
texture I was looking for. My doughs would tend to
|
||||
overferment relatively quickly. When using a flower
|
||||
with a similar amount of gluten that didn't contain
|
||||
bran and other outer parts of the grain my doughs turned
|
||||
out great. I was utilizing an extended autolyse.
|
||||
That's a fancy word for just mixing flour and water in
|
||||
advance and letting that mixture sit. Most recipes
|
||||
call for it as the help to make a dough that has already
|
||||
started to break down by enzymes. In general it's a great
|
||||
idea but at the same time you can just reduce the amount
|
||||
of leavening agent you use. This way the same biochemical
|
||||
reactions happen and you don't have to mix your dough
|
||||
several times. My whole wheat game drastically improved
|
||||
when I stopped using the autolysis. It makes sense if I
|
||||
think about it now. The first parts of the seed that
|
||||
are in contact with water are the outer parts. Water
|
||||
will slowly enter the center parts of the grain. The
|
||||
moment the seed starts to sprout it needs to outcompete
|
||||
other nearby seeds. Furthermore it also directly becomes
|
||||
exposed to other animals and potential hazardous bacteria
|
||||
and fungi. To accelerate this process most of the enzymes
|
||||
of the grain are in the outer parts of the hull. They
|
||||
are being activated first (source needed). So by just
|
||||
adding a little bit of whole flour to your dough you
|
||||
will improve enzymatic activity of your dough. That's
|
||||
why most of my plain flour doughs typically contain
|
||||
at least 10-20 percent whole wheat flour.
|
||||
As explained previously, malt is a common trick used to speed up enzymatic
|
||||
activity. Personally, however, I prefer to avoid malt and instead use a
|
||||
trick I learned while making whole-wheat breads.
|
||||
|
||||
When I first started making whole-wheat bread, I could never achieve the
|
||||
crust, crumb, or texture I desired no matter what I tried. Instead, my dough
|
||||
tended to overferment rather quickly. When using a white flour with a similar
|
||||
gluten content, however, my bread always turned out great.
|
||||
|
||||
At the time, I utilized an extended autolyse, which is just a fancy word for
|
||||
mixing flour and water in advance and then letting the mixture sit. Most
|
||||
recipes call for it as the process gives the dough an enzymatic head start, and
|
||||
in general it's a great idea. However, as an equally effective alternative,
|
||||
you could simply reduce the amount of leavening agent used (in the case of
|
||||
sourdough, this would be your starter). This would allow the same biochemical
|
||||
reactions to occur at roughly the same rate without requiring you to mix your
|
||||
dough several times. My whole wheat game improved dramatically after I stopped
|
||||
autolysing my doughs.
|
||||
|
||||
Now that I've had time to think about it, the result I observed makes sense.
|
||||
In nature, the outer parts of the seed come into contact with water first, and
|
||||
only after penetrating this barrier would the water slowly find its way to the
|
||||
center of the grain. The seed needs to sprout first to outcompete other nearby
|
||||
seeds, requiring water to enter quickly. Yet the seed must also defend itself
|
||||
against animals and potentially hazardous bacteria and fungi, requiring some
|
||||
barrier to protect the embryo inside. A way for the plant to achieve both goals
|
||||
would be for most of the enzymes to exist in the outer parts of the hull. As a
|
||||
result, they are activated first (source needed). Therefore, by just adding a
|
||||
little bit of whole flour to your dough, you should be able to significantly
|
||||
improve the enzymatic activity of your dough. That's why, for plain white flour
|
||||
doughs, I usually add 10\textendash20\% whole-wheat flour.
|
||||
|
||||
\begin{figure}
|
||||
\includegraphics[width=\textwidth]{whole-wheat-crumb}
|
||||
\caption{A whole wheat sourdough bread}
|
||||
\caption{A whole-wheat sourdough bread}
|
||||
\label{whole-wheat-crumb}
|
||||
\end{figure}
|
||||
|
||||
|
||||
By understanding the 2 key enzymes amylase and protease
|
||||
you will better be able to understand how to make a
|
||||
dough to your liking. Would you like a dough a softer
|
||||
or stiffer crumb? Would you like to achieve a darker crust?
|
||||
Would you like to reduce the amount of gluten in your
|
||||
final bread? These are all factors you can influence
|
||||
by adjusting the speed of fermentation.
|
||||
By understanding the two key enzymes \textit{amylase} and \textit{protease}, you
|
||||
will be better equipped to make bread to your liking. Do you prefer a softer
|
||||
or stiffer crumb? Do you desire a lighter or darker crust? Do you wish to reduce
|
||||
the amount of gluten in your final bread? These are all factors that you can
|
||||
tweak just by adjusting the speed of your dough's fermentation.
|
||||
|
||||
\section{Yeast}
|
||||
|
||||
Yeasts are single celled microorganisms that are part of
|
||||
the fungus kingdom. Yeast spores that are hundreds
|
||||
of million years old have been identified by scientists.
|
||||
There is a wide variety of species and so far around 1500
|
||||
different species have been recognized. Yeasts are not creating
|
||||
a mycelium network like mold does for instance
|
||||
\cite{molecular+mechanisms+yeast}.
|
||||
% Yeast is both the singular and plural form of the word unless you're
|
||||
% specifically referencing a plural number of varieties or types, in which case
|
||||
% "yeasts" would be correct.
|
||||
Yeast are single celled microorganisms belonging to the fungi kingdom, and
|
||||
spores that are hundreds of millions of years old have been identified by
|
||||
scientists. There are a wide variety of species: So far, about 1,500 have been
|
||||
identified. Unlike other members of the fungi kingdom, such as mold, yeast do
|
||||
not ordinarily create a mycelium network \cite{molecular+mechanisms+yeast}
|
||||
\footnote{For one interesting exception, skip ahead to the end of this
|
||||
section.}.
|
||||
|
||||
\begin{figure}[!htb]
|
||||
\centering
|
||||
@@ -211,106 +221,105 @@ a mycelium network like mold does for instance
|
||||
\label{saccharomyces-cerevisiae-microscope}
|
||||
\end{figure}
|
||||
|
||||
Yeast are saprotrophic fungi. This means that they do not produce their own
|
||||
food, but instead rely on external sources that they can decompose and break
|
||||
down into compounds that are more easily metabolized.
|
||||
|
||||
Yeasts are saprotrophic fungi. This means they are not
|
||||
producing their own food. They rely on external food sources
|
||||
which they decompose and break down. For yeasts
|
||||
carbohydrates and broken down to carbon dioxide and
|
||||
alcohols. The products of this fermentation process
|
||||
have been used for thousands of years when making
|
||||
bread or alcoholic beverages. Yeasts can grow
|
||||
in both aerobic and anaerobic conditions. When oxygen
|
||||
is present the yeast almost completely produces
|
||||
carbon dioxide and water. When no oxygen is present
|
||||
the yeast starts switches its metabolism. The
|
||||
yeast starts to produce alcoholic compounds \cite{effects+oxygen+yeast+growth}.
|
||||
The temperatures at which the yeast grows vary. Some
|
||||
yeasts such as {\it Leucosporidium frigidum} grows
|
||||
best at temperatures between -2°C up to 20°C. Other
|
||||
yeast grows better at higher temperatures. The warmer
|
||||
it is the faster the yeast's metabolism works. The yeast
|
||||
that you cultivate in your sourdough starter works best
|
||||
at the temperatures where the grain was grown and at
|
||||
the point when it was harvested. So if you are from a
|
||||
cooler place and cultivate a sourdough starter from
|
||||
a nordic rye variety, then chances are your yeast
|
||||
prefers this colder environment. As an example
|
||||
beer makers discovered that a beneficial yeast lives
|
||||
in the cold caves around the city of Pilsen, Czech Republic.
|
||||
This yeast has produced excellent tasting beers at
|
||||
lower temperatures. Varieties of these strains
|
||||
are now used to make popular lager beers.
|
||||
Yeast breaks down carbohydrates into carbon dioxide and alcohol in what we today
|
||||
refer to as the fermentation process. This process has been known for thousands
|
||||
of years and has been used since ancient times for the making of bread as well
|
||||
as alcoholic beverages.
|
||||
|
||||
Yeasts in general are very common in the environment.
|
||||
They can be found on cereal grains, fruits, other plants
|
||||
in the soil and also in your gut. Very little is known
|
||||
about the ecology of why yeasts we use for baking
|
||||
are cultivating the leaves of the plants. The plants
|
||||
are protected via the cell walls and hardly any
|
||||
fungi and other bacteria can penetrate. Some fungi and
|
||||
bacteria are producing enzymes that are able
|
||||
to break down the cell walls and infect the plant.
|
||||
There are fungi and bacteria that live within the plant
|
||||
without causing any distress. These are known as {\it endophytes}.
|
||||
They are not damaging the plant per se. In fact they are
|
||||
living in a symbiotic relationship with the host. They
|
||||
help the plant to protect itself from additional pathogens
|
||||
that might enter through the leaves of the plant. They
|
||||
help with water stress, heat stress and nutrient availability.
|
||||
In exchange for the service they receive carbon for energy
|
||||
from the plant host. They are not always strictly mutualistic though.
|
||||
Sometimes under stress conditions they can become pathogens
|
||||
on their own \cite{endophytes+in+plants} and decay begin
|
||||
decaying the plant.
|
||||
Yeast can grow and multiply under both aerobic and anaerobic conditions. When
|
||||
oxygen is present, they produce carbon dioxide and water almost exclusively.
|
||||
When oxygen is not present, their metabolism changes to produce alcoholic
|
||||
compounds \cite{effects+oxygen+yeast+growth}.
|
||||
|
||||
The yeasts we use for baking are
|
||||
living as as epiphytes on the plant. Compared to
|
||||
the previously mentioned endophytes they are not
|
||||
breaching the walls of the cells. Most of them
|
||||
receive nutrients from rain water, the air or other animals.
|
||||
These sources also include honeydew produced
|
||||
by aphids. Pollen that lands on the leaf's surface
|
||||
is an additional source of food. Interestingly
|
||||
though when you remove that external food source,
|
||||
you still find a large variety of epiphytic fungi
|
||||
and bacteria on the plant's surface. The food
|
||||
for them is coming directly from the plant it seems.
|
||||
Some research has shown that the plants are
|
||||
on purpose releasing some compounds such as sugars,
|
||||
organic acids, amino acids, some methanol and various
|
||||
salts via the surface. These nutrients would
|
||||
then attract the epiphytes to live on the surface.
|
||||
The plants benefit from enhanced protection against
|
||||
mold and other pathogens. It is in the best interest
|
||||
of the epiphytes to keep the plants alive
|
||||
as long as possible \cite{leaf+surface+sugars+epiphytes}.
|
||||
More and more research is conducted on using yeasts
|
||||
as a biocontrol agents to protect plants. These bio-agents
|
||||
would be food-safe as yeasts are generally considered save.
|
||||
The yeasts would start to grow on the leaves on the plant
|
||||
and essentially shield the plants from other molds. This
|
||||
could be a game changer for wineyeards suffering from mildew.
|
||||
This could also be helpful to shield the plant against the
|
||||
psychoactive ergot fungus. The ergot fungus likes to grow
|
||||
in more humid colder environments and poses a huge
|
||||
problem to rye farmers. The fungus parasites the plant
|
||||
and infects it. Consumption of ergot is not recommended
|
||||
as it is highly toxic to the liver. That's why lawmakers
|
||||
have recently reduced the amount of allowed ergot contamination
|
||||
in rye flour. Another interesting experiment from Italian scientists
|
||||
visualized how important yeasts could be when protecting
|
||||
plants. They added tiny incisions into some of the grapes.
|
||||
They would then infect some of the damaged surfaces with
|
||||
mold. The other wounds they infected with some of the 150
|
||||
different wild yeast strains isolated from the leaves plus
|
||||
the mold. When mixing the mold with the yeast the grape
|
||||
The temperatures at which yeast grows varies. Some yeasts, such as
|
||||
{\it Leucosporidium frigidum}, do best at temperatures ranging from -2°C to
|
||||
20°C, while others prefer higher temperatures. In general, the warmer the
|
||||
environment, the faster the yeast's metabolism. The variety of yeast
|
||||
that you cultivate in your sourdough starter should work best within the range
|
||||
of temperatures where the grain was grown and harvested. So, if you are from a
|
||||
cooler place and cultivate a sourdough starter from a nordic rye variety,
|
||||
chances are your yeast will prefer a colder environment.
|
||||
|
||||
As an example, beer makers discovered a beneficial yeast living in the cold
|
||||
caves around the city of Pilsen, Czech Republic. This yeast has since become
|
||||
known for producing excellent beers at lower temperatures and varieties of
|
||||
these strains are now used for brewing popular lagers.
|
||||
|
||||
Yeasts in general are very common organisms. They can be found on cereal
|
||||
grains, fruits, and many other plants in the soil. They can even be found
|
||||
inside your gut! As it happens, the types of yeast we use for baking are
|
||||
cultivated on the leaves of plants, though very little is known about the
|
||||
ecology involved.
|
||||
|
||||
Plants are protected by thick cell walls that few fungi or bacteria can
|
||||
penetrate. However, there are some species that produce enzymes capable of
|
||||
breaking down those cell walls so they can infect the plant.
|
||||
|
||||
Some fungi and bacteria live inside plants without causing them any distress.
|
||||
These are known as {\it endophytes}. Not only do they \textit{not} damage their
|
||||
host, they actually live in a symbiotic relationship, helping the plants in
|
||||
which they dwell to protect themselves from other pathogens that might also
|
||||
come to infect them through their leaves. In addition to this protection, they
|
||||
also help with water and heat stress, as well as the availability of nutrients.
|
||||
In exchange for their service to their host plants, these fungi and bacteria
|
||||
receive carbon for energy.
|
||||
|
||||
However, the relationship between endophyte and plant is not always mutually
|
||||
beneficial, and sometimes, under stress, they become invasive pathogens and
|
||||
ultimately cause their host to decay \cite{endophytes+in+plants}.
|
||||
|
||||
There are other microorganisms that, unlike endophytes, do not penetrate cell
|
||||
walls but instead live on the plant's surface and receive nutrients from rain
|
||||
water, the air, or other animals. Some even feed on the honeydew produced by
|
||||
aphids or the pollen that lands on the surface of the leaves. Such organisms
|
||||
are called \textit{epiphytes}, and included among them are the types of yeast
|
||||
we use for baking.
|
||||
|
||||
Interestingly, when you remove external food sources, a large number of
|
||||
epiphytic fungi and bacteria can still be found on the plant's surface,
|
||||
suggesting that they must somehow be feeding directly from the plant.
|
||||
Indeed, there is some research indicating that some plants intentionally release
|
||||
compounds such as sugars, organic and amino acids, methanol, and various
|
||||
salts along the surface. These nutrients would then attract the epiphytes that
|
||||
live on the plant's surface.
|
||||
|
||||
Epiphytes are advantageous to a plant's survival, as they are provided with
|
||||
enhanced protection against mold and other pathogens. Indeed, it is in the
|
||||
best interest of the epiphytes to keep their host plants alive for as long as
|
||||
possible \cite{leaf+surface+sugars+epiphytes}.
|
||||
|
||||
More research is conducted every day in ways that yeasts can be used as
|
||||
biocontrol agents to protect plants, the advantage being that these bio-agents
|
||||
would be food-safe as the relevant strains of yeast are generally considered
|
||||
harmless to humans. The yeasts would grow and multiply on the leaves,
|
||||
esentially shielding them from other types of mold. This could be a potential
|
||||
game changer for vineyards that suffer from mildew.
|
||||
|
||||
Such bio-agents could also be used to shield plants against the psychoactive
|
||||
ergot fungus, which likes to grow in colder, more humid environments and
|
||||
poses a significant problem for rye farmers. Because it infects the grain
|
||||
and makes it unfit for consumption due to its high toxicity to the liver,
|
||||
lawmakers have recently reduced the amount of allowed ergot contamination in
|
||||
rye flour.
|
||||
|
||||
There is another interesting experiment performed by Italian scientists that
|
||||
shows how crucial yeasts could be in protecting our crops. First, they made
|
||||
tiny incisions into some of the grapes on a vine. Then, they infected the
|
||||
wounds with mold. Some incisions were only infected with mold. Others were also
|
||||
innoculated with some of the 150 different wild yeast strains isolated from the
|
||||
leaves. They found that when the wound was innoculated with yeast, the grape
|
||||
sustained no significant damage \cite{yeasts+biocontrol+agent}.
|
||||
In another experiment however scientists have shown
|
||||
how the brewer's yeast became an aggressive pathogen to wine plants.
|
||||
Initially the yeast lived in symbiosis with the plant. After the grapevine
|
||||
sustained damages the yeast became opportunistic and started to
|
||||
attack the plant event producing hyphae to deeply
|
||||
penetrate the plants tissue.
|
||||
|
||||
Intriguingly, there was also an experiment performed that showed how brewer's
|
||||
yeast could function as an aggressive pathogen to grape vines. Initially, the
|
||||
yeast lived in symbiosis with the plants, but after the vines sustained heavy
|
||||
damage, the yeast became opportunistic and started to attack, even going so far
|
||||
as to produce hyphae, the mycellium network normally associated with a fungus,
|
||||
so that they could penetrate the tissue of the plants.
|
||||
|
||||
\section{Bacteria}
|
||||
|
||||
|
||||
@@ -1,14 +1,13 @@
|
||||
This book would not have been possible without the help of the community.
|
||||
All the donations have made it possible that I was able to take
|
||||
some time off from my job and YouTube to write this free book.
|
||||
By providing this information free to everyone we can
|
||||
enable more people around the world to bake delicious
|
||||
sourdough bread at home. Thank you very much!\\
|
||||
Because of the donations received, I have been able to take time off from
|
||||
my job and from YouTube to write it. By providing this information free
|
||||
of charge, we can help more people around the world bake delicious sourdough
|
||||
bread at home. Thank you very much!\\
|
||||
|
||||
\begin{filecontents}{supporters.csv}
|
||||
\end{filecontents}
|
||||
|
||||
{\large All supporters sorted by name}
|
||||
{\large All supporters, sorted by name:}
|
||||
|
||||
\pgfplotstableset{
|
||||
begin table=\begin{longtable},
|
||||
|
||||
Reference in New Issue
Block a user